Publications and Patent

Research Highlight

A portion of our research is featured on the following websites. For more details, please visit the link below.

WARF (Wisconsin Alumni Research Foundation)

Yokogawa Electric Corporation (A pioneer and leading company of spinning disc confocal microscopy)

Tokai Hit Inc (Japanese) and Long-term Live cell imaging movie (48 hours with 3 min internals) (a leading company of microscope incubators)

Center for Structural Biology of HIV RNA (CRNA)

Research Highlight” in Journal of Cell Science, 2024 (ImmunoCellCycle-ID paper)

Preview: How Kinetochores CCAN Resist Force” in Developmental Cell, 2014

In Focus” in Journal of Cell Biology, 2011

 

Publications

Published in Peer-Reviewed Journals

Reverse Chronological Order. Papers published within the current year will link to the respective PubMed or journal website.

(†Equal contribution, §Lead contact, *Corresponding author, #Co-first authors)

(Graduate student/Postbac authorship is bolded. Undergraduate Student authorship is underlined)

Suzuki Google Scholar Profile                   Pubmed Link                  Bibliography

2024

38) Chen, YC., Kilic, E., Wang, E., Rossman, W., Suzuki, A.* CENcyclopedia: Dynamic Landscape of Kinetochore Architecture Throughout the Cell Cycle.  bioRxiv

37) Chen, YC., Takada M., Nagornyuk, A., Yu, M., Yamada, H., Nagashima, T., Ohtsuka, M., DeLuca, JG., Markus, S., Takaku, M., Suzuki, A.* Inhibition of p38-MK2 pathway enhances the efficacy of microtubule inhibitors in breast cancer cells. eLife (under revision). Original BioRxiv version is available here.

36) Chen, YL., Reddy, S., Suzuki, A.* Reversible and effective cell cycle synchronization method for studying stage-specific investigation. Under peer-review in bioRxiv, Under revision

35) Chen, YL. and Suzuki, A.* “Advanced High-Resolution and Super-Resolution Microscopy Techniques for Investigating Chromatin Structure and Epigenetics”, Methods in Molecular Biology, in press

34) Norman, R.†, Chen, YC.†, Recchia M., Loi, J., Rosemarie, Q., Lesko, S., Patel, S., Sherer, NM., Takaku, M., Burkard, M., Suzuki, A.* One step 4x and 12x 3D-ExM enables robust super-resolution microscopy of nanoscale cellular structures. Journal of Cell Biology , 224 (2): e202407116, 2025. Original bioRxiv version is available here.

33) Chen, YL., Chen, YC., Suzuki, A.* ImmunoCellCycle-ID: A high-precision immunofluorescence-based method for cell cycle identification. Journal of Cell Science, 15, November 2024; 137 (22): jcs263414, Original bioRxiv version is available here.

This paper is selected for “Research Highlight” in Journal of Cell Science.

32) Ghone, D., Evans III, EL.,  Bandini, M., Stephenson, KG., Sherer, NM.*, Suzuki, A.* “HIV-1 Vif disrupts phosphatase feedback regulation at the kinetochore leading to a pronounced pseudo-metaphase arrest“, eLife, Original bioRxiv is available here.

This is our first “Virology” and “HIV-1 research” paper!!

31) Loi, J., Ghone D., Qu, X., Suzuki, A*. 3D-Aligner: An advanced computational tool designed to correct image distortion in expansion microscopy for precise 3D reconstitution and quantitative analysis. Communications Biology, 7, 1325, (2024). Original bioRxiv version is available here.

30) Alsina, FC., Lupan, BM., Lin, LJ., Musso, CM., Mosti, F., Newman, CR., Wood, LM., Suzuki, A., Agostino, M., Moore, JK., Silver, DL. “The RNA-binding protein EIF4A3 promotes axon development by direct control of the cytoskeleton“, Cell Reports, Aug 23;43(9), 2024

29) Lin, CC. and Suzuki, A.* “Calibrating Fluorescence Microscopy with 3D-Speckler (3D fluorescence speckle analyzer)“, Bio-protocol, Vol 14, Iss 16, Aug 20, 2024

28) Yamada H., Takada M., Ghone D., Yu M.,  Nagashima, T., Fujimoto, H., Sakakibara, J., Hasegawa Y., Takao, S., Yamada, A., Narui, K., Ishikawa, T., Suzuki, A., Ohtsuka, M. Eribulin induces micronuclei and enhances the nuclear localization of cGAS in triple-negative breast cancer cells. Scientific Reports, 14(1):14146, 2024

27) Wu, C., Balakrishnan, VK., Parihar, PS., Konovolov, K., Chen, YC., Merrill, RA., Wei, H., Carragher, B., Sundaresan, R., Cui, Q., Wadzinski, BE., Swingle, MR., Musiyenko, A., Honkanen, R., Chung, W., Suzuki, A., Strack, S., Huang, X., Xing, Y. Extended regulation interface coupled to the allosteric network and disease mutations in the PP2A-B56 holoenzyme.   Proceedings of the National Academy of Sciences (PNAS), 121 (1) e2310727120, 2024

2023

26) Loi, J., Qu, X., Suzuki, A.* Semi-automated 3D fluorescence speckle analyzer (3D-Speckler) for microscope calibration and nanoscale measurement.  Journal of Cell Biology, 222, (4), 2023.

2022

25) Bakshi, DD., Chen, YC., Wuerzberger-Davis, SM., Ma, M., Waters, BJ., Li, L., Suzuki, A.,  Miyamoto, S. Ectopic CH60 mediates HAPLN1-induced cell survival signaling in multiple myelomaLife Science Alliance, Vol 6, no 3, e202201636, (2022).

2021

24) Kim. EJ., Liu, P., Zhang, S., Donahue, K., Wang, Y., Schehr, JL., Wolfe, SK., Dickerson, A., Lu, L., Rui, L., Zhong, X., Wisinski, KB., Yu, M., Suzuki, A., Lang, JM., Ong, IM., Xu, W. BAF155 methylation drives metastasis by hijacking super-enhancers and subverting anti-tumor immunityNucleic Acids Research, 49 (21), (2021).

2020

23) Franks, JL, Martinez-Chacin, RC., Wang, X., Tiedemann RL., Bonacci, T., Choudhury, R., Bolhuis, DL., Enrico, TP., Mouery, RD., Damrauer, JS, Yan, F., Harrison, JS., Major, MB., Hoadley, KA.,  Suzuki, A., Rothbart, SB., Brown, NG., Emanuele, MJ. In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators. PLoS Biology, 18 (12), e3000975, (2020).

2018

22) Suzuki, A.*, Varma, D.* Cell Division: The Unattached Kinetochore Wears an Expansive RZZ Coat. Current Biology, 28, R1250-1252, (2018).

21) Suzuki, A.†, §, *, Gupta, A.†, Long, SK., Evans, R., Badger, BL., Salmon, ED., Biggins, S.*, Bloom, K. A Kinesin-5, Cin8, Recruits Protein Phosphatase 1 to Kinetochores and Regulates Chromosome Segregation. Current Biology, 28 (17), 2697-2704.
-Featured in Dispatch entitled “Cell Division: Here Comes the Kinesin Cavalry” in Current Biology, 28 (17), R943-R946.

20) Agarwal, S., Smith, KP., Zhou, Y., Suzuki, A., McKenney RJ., Varma, D. Cdt1 stabilizes kinetochore-microtubule attachments via an Aurora B kinase-dependent mechanism. Journal of Cell Biology, 217 (10), 2697-2704, (2018).

19) Bonacci, T., Suzuki, A., Grant, GD., Stanley, N., Cook, JG., Brown, NG., Emanuele MJ. Cezanne/OTUD7B is a cell cycle-regulated deubiquitinase that antagonizes the degradation of APC/C substratesEMBO journal, 37 (15), 1-17, (2018).

18) Fadero, TC., Gerbich, TM.†, Rana, K.†, Suzuki, A., DiSalvo, M., Schaefer, KN., Heppert, JK., Boothby, TC., Goldstein, B., Peifer, M., Allbritton, NL., Gladfelter, AS., Maddox, AS., and Maddox, PS. LITE microscopy: Tilted light-sheet excitation of model organisms offers high resolution and low photobleachingJournal of Cell Biology, 217 (5), 1869-1882 (2018).

17) Suzuki, A.*, Long, SK., Salmon, ED. An Optimized Method for 3D Fluorescence Co-Localization Applied to Human Kinetochore Protein ArchitectureeLife, 7, (2018).
-This article is recommended by “Faculty of 1000”.

2017

16) Mills, CA., Suzuki, A., Arceci, A., Mo, JY., Duncan, A., Salmon, ED., Emanuele M. Nucleolar and spindle-associated protein 1 (NUSAP1) interacts with a SUMO E3 ligase complex during chromosome segregationJournal of Biological Chemistry, 292 (42), 17178-17189, (2017).
-Featured in cover.

15) Takada, M.†, Zhang, W.†, Suzuki, A., Kuroda, TS., Yu, Z., Inuzuka, H., Gao, D., Wan, L., Zhuang, M., Hu, L., Zhai, B., Fry, CJ., Bloom, K., Li, G., Karpen, GH.*, Wei, W.*, Zhang, Q.* FBW7 Loss Promotes Chromosomal Instability and Tumorigenesis via Cyclin E1/CDK2-Mediated Phosphorylation of CENP-ACancer Research, 77, 4881-4893, (2017).
-This article is recommended by “Faculty of 1000”.

2016

14) Lera, RF., Potts, GK., Suzuki, A., Johnson, JM., Salmon, ED., Coon, JJ., Burkard, ME. Decoding Polo-like kinase 1 signaling along the kinetochore-centromere axisNature Chemical Biology, 12, 411-418, (2016).

13) Suzuki, A.*, Badger, BL., Haase, J., Ohashi, T., Erickson, HP., Salmon ED., Bloom, K. How the kinetochore couples microtubule force and centromere stretch to move chromosomes. Nature Cell Biology, 18, 382-392, (2016).
-This article is recommended by “Faculty of 1000”.

12) Pilaz LJ., McMahon, JJ., Miller EE., Lennox, AL., Suzuki, A., Salmon, ED., Silver DL. Prolonged mitosis of neural progenitor alters cell fate in the developing brainNeuron, 89(1), 83-99 (2016).
-This article is recommended by “Faculty of 1000”.

2015

11) Suzuki, A.*, Badger, BL., Salmon, ED.* A Quantitative Description of Ndc80 Complex Linkage to Human KinetochoreNature Communications, 6, 8161, (2015).

2014

10) Suzuki, A.*, Badger, BL., Wan, X., DeLuca, JG., Salmon, ED.* The architecture of CCAN proteins creates a structural integrity to resist spindle forces and achieve proper intrakinetochore stretchDevelopmental Cell, 30, 717-730, (2014).
-Featured in Previews entitled “How Kinetochores CCAN Resist Force” in Developmental Cell, 30, 637-638.
-Featured on Developmental Cell’s top website page.

9) Ishiguro, KI., Kim, J., Shibuya H., Hernández-Hernández, A., Suzuki, A., Fukagawa, T., Shioi, G., Kiyonari, H., Li, XC., Schimenti, J., Höög, C., Watanabe Y. Meiosis-specific cohesion mediates homolog recognition in mouse spermatocytesGenes & Development, 28, 594-607, (2014).

2013

8) Varma, D., Wan, X., Cheerambathur, D., Gassmann, R., Suzuki, A., Lawrimore, J., Desai, A., Salmon, ED. Spindle assembly checkpoint proteins are positioned close to core microtubule attachment sites at kinetochores. Journal of Cell Biology, 202, 735-746, (2013).

2012

7) Nishino, T., Takeuchi, K., Gascoigne, KE., Suzuki, A., Hori, T., Oyama, T., Morikawa, K., Cheeseman, IM., Fukagawa, T. CENP-T-W-S-X forms a unique centrometric chromatin structure with a histone-like foldCell, 148, 487-501, (2012).
-This article is recommended by “Faculty of 1000”.

2011

6) Gascoigne, KE., Takeuchi, K., Suzuki, A., Hori, T., Fukagawa, T., Cheeseman, IM. Induced Ectopic Kinetochore Assembly Bypasses the Requirement for CENP-A NucleosomesCell, 145, 410-422, (2011).
-This article is recommended by “Faculty of 1000”.

5) Suzuki, A., Hori, T., Nishino, T., Usukura, J., Miyagi, A., Morikawa, K., Fukagawa, T. Spindle microtubules generate tension-dependent changes in the distribution of inner kinetochore proteinsJournal of Cell Biology, 193, 125-140, (2011).
-Featured in In Focus entitled “Kinetochores feel the pull” in Journal of Cell Biology, 193, 3.
-This article is recommended by “Faculty of 1000”.

4) Suzuki, A., Fukagawa, T. Cell Biological Analysis of DT40 Knockout Cell Lines for Cell-Cycle GenesCurrent Protocols in Cell Biology, 8; 8.7.1-8.7.17, (2011).

2010

3) Johnston, K., Joglekar, A., Hori, T., Suzuki, A., Fukagawa, T., Salmon, ED. Vertebrate kinetochore protein architecture: protein copy numberJournal of Cell Biology, 189(6), 937-943, (2010).

2009

2) Amano, M.#, Suzuki, A.#, Hori, T.#, Backer, C., Okawa, K., Cheeseman, IM., Fukagawa, T. The CENP-S complex is essential for the stable assembly of outer kinetochore structureJournal of Cell Biology, 186, 173-182, (2009).

2008

1) Hori, T., Amano, M., Suzuki, A., Backer, CB., Welburn, JP., Dong, Y., McEwen, BF., Shang, WH., Suzuki, E., Okawa, K., Cheeseman, IM., Fukagawa, T. CCAN makes multiple contacts with centromeric DNA to provide distinct pathways to the outer kinetochoreCell, 135, 1039-1052, (2008).

Patent

Suzuki Lab is highlighted in WARF(Wisconsin Alumni Research Foundation) website

1. “KITS AND METHODS FOR SUPER-RESOLUTION MICROSCOPY”

Inventors: Aussie Suzuki, Mark Burkard, Roshan Norman, Emma Recchia

Patent Application Publication No. US-2022-0074829 and WARF: P200189US02

Highlighted in WARF microscopy special section

2. “Microtubule Labeled Slides Used for Calibration of Various Fluorescence Microscopes

Inventors: Aussie Suzuki

WARF: P200284US01

Highlighted in WARF microscopy special section